Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468073: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315433' containing sample 'Staphylococcus aureus T66622'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.5M spots, 1.1G bases, 512.4Mb downloads

UUID: 8b635907-ad2b-4719-b0fc-66d28ab41a7a

Design: Illumina sequencing of Staphylococcus aureus T66622 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227639 • SRP037236 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T66622

SAMN02402563 • SRS555588 • All experiments • All runs

Organism: Staphylococcus aureus T66622

Library:

Name: Pond-315433

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462742.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASUR

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G54043

research_project: RP-509

root_sample_id: SM-4T29A

sample_id: SM-5ASUR

work_request: 39229

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.5M spots, 1.1G bases, 512.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165733	2,741,837	553.9M	257.7Mb	2014-02-09
SRR1167461	2,720,804	549.6M	254.7Mb	2014-02-11

ID:: 648261

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